Last updated on 2026-03-26 18:53:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.25 | 273.36 | 287.61 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.17 | 303.02 | 314.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 192.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 485.00 | 497.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 195.00 | 217.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 442.00 | 452.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 282.00 | 306.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/435s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.528, system: 0.041, elapsed: 3.778 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.057, elapsed: 20.038 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.019, elapsed: 0.587 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.874, system: 0.745, elapsed: 49.500 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.247 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.006, system: 0.889, elapsed: 75.234 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.033, elapsed: 2.357 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.738, system: 0.048, elapsed: 13.867 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.017, elapsed: 0.620 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.002, system: 0.774, elapsed: 60.135 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.003, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.326, system: 0.902, elapsed: 78.110 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.034, elapsed: 2.466 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.536, system: 0.066, elapsed: 20.735 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 1.148 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.039, system: 0.785, elapsed: 71.092 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.242 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.236, system: 0.246, elapsed: 1.508 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.509, system: 1.195, elapsed: 98.488 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.036, elapsed: 2.773 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.656, system: 0.060, elapsed: 16.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 0.600 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.932, system: 0.819, elapsed: 111.469 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.328 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.477, system: 0.621, elapsed: 40.377 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.761, system: 1.593, elapsed: 173.405 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/391s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.044, elapsed: 2.529 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.667, system: 0.065, elapsed: 12.586 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.019, elapsed: 0.651 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.701, system: 0.756, elapsed: 73.301 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.945, system: 0.910, elapsed: 90.186 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.037, elapsed: 3.147 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.822, system: 0.061, elapsed: 15.342 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.015, elapsed: 0.728 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.744, system: 0.814, elapsed: 107.110 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.335 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.151, system: 0.949, elapsed: 127.613 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.031, elapsed: 3.446 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.564, system: 0.065, elapsed: 22.040 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 1.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.414, system: 0.669, elapsed: 51.074 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.006, elapsed: 0.188 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.298, system: 0.324, elapsed: 1.104 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.882, system: 1.138, elapsed: 80.398 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.600, system: 0.036, elapsed: 1.802 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.669, system: 0.066, elapsed: 13.782 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.015, elapsed: 0.526 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.629, system: 0.692, elapsed: 36.638 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.322, system: 0.602, elapsed: 31.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.295, system: 1.450, elapsed: 85.613 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64