Help for package vazul

Title:

Analysis Blinding Tools

Version:

1.1.0

Description:

Provides tools for analysis blinding in confirmatory research contexts by masking and scrambling test-relevant aspects of data. Vector-, data frame-, and row-wise operations support blinding for hierarchical and repeated-measures designs. For more details see MacCoun and Perlmutter (2015) <doi:10.1038/526187a> and Dutilh, Sarafoglou, and Wagenmakers (2019) <doi:10.1007/s11229-019-02456-7>.

License:

MIT + file LICENSE

URL:

https://nthun.github.io/vazul/

BugReports:

https://github.com/nthun/vazul/issues

Depends:

R (≥ 4.1.0)

Imports:

dplyr, lifecycle, rlang, tidyselect, stats

Suggests:

testthat, covr, knitr, quarto

VignetteBuilder:

quarto

Config/testthat/edition:

Encoding:

UTF-8

LazyData:

true

RoxygenNote:

7.3.3

NeedsCompilation:

Packaged:

2026-02-06 17:49:54 UTC; t

Author:

Tamás Nagy

[aut, cre], Alexandra Sarafoglou

[aut, dtc], Márton Kovács

[aut]

Maintainer:

Tamás Nagy <nagytamas.hungary@gmail.com>

Repository:

CRAN

Date/Publication:

2026-02-07 07:50:02 UTC

vazul: Analysis Blinding Tools

Description

Provides tools for analysis blinding in confirmatory research contexts by masking and scrambling test-relevant aspects of data. Vector-, data frame-, and row-wise operations support blinding for hierarchical and repeated-measures designs. For more details see MacCoun and Perlmutter (2015) doi:10.1038/526187a and Dutilh, Sarafoglou, and Wagenmakers (2019) doi:10.1007/s11229-019-02456-7.

Author(s)

Maintainer: Tamás Nagy nagytamas.hungary@gmail.com (ORCID)

Authors:

Alexandra Sarafoglou alexandra.sarafoglou@gmail.com (ORCID) [data contributor]
Márton Kovács marton.balazs.kovacs@gmail.com (ORCID)

MARP: Many analysts religion project dataset

Description

A cross-cultural dataset from the Many-Analysts Religion Project (MARP), which investigated the relationship between religiosity and well-being across 24 countries and diverse religious traditions.

Usage

data(marp)

Format

A data frame with 10,535 rows (participants) and 48 variables:

subject: Unique subject identifier (integer).
country: Country of residence (character string).
rel_1: Importance of religion in daily life (0–10 scale).
rel_2: Frequency of religious service attendance (ordinal).
rel_3: Self-rated religiosity (0–10 scale).
rel_4: Belief in God (binary: yes/no).
rel_5: Prayer frequency (ordinal).
rel_6: Bible/study frequency (ordinal).
rel_7: Religious upbringing (binary: yes/no).
rel_8: Current religious denomination (categorical).
rel_9: Change in religiosity over lifetime (ordinal).
cnorm_1: Perceived cultural norm: importance of religious lifestyle for average person in country (0–10).
cnorm_2: Perceived cultural norm: importance of belief in God for average person in country (0–10).
wb_gen_1: Overall life satisfaction (1–5 Likert).
wb_gen_2: Overall happiness (1–5 Likert).
wb_phys_1: Energy level (1–5).
wb_phys_2: Sleep quality (1–5).
wb_phys_3: Appetite (1–5).
wb_phys_4: Physical pain/discomfort (1–5).
wb_phys_5: General health (1–5).
wb_phys_6: Exercise frequency (1–5).
wb_phys_7: Illness burden (1–5).
wb_psych_1: Positive affect (1–5).
wb_psych_2: Negative affect (reverse coded; 1–5).
wb_psych_3: Meaning in life (1–5).
wb_psych_4: Purpose in life (1–5).
wb_psych_5: Hopefulness (1–5).
wb_psych_6: Anxiety (reverse coded; 1–5).
wb_soc_1: Social support (1–5).
wb_soc_2: Loneliness (reverse coded; 1–5).
wb_soc_3: Community belonging (1–5).
wb_overall_mean: Mean of all well-being items (numeric).
wb_phys_mean: Mean of physical well-being items (numeric).
wb_psych_mean: Mean of psychological well-being items (numeric).
wb_soc_mean: Mean of social well-being items (numeric).
age: Age in years (integer).
gender: Self-reported gender (character: e.g., "Male", "Female", "Other").
ses: Socioeconomic status composite (numeric).
education: Highest education level completed (ordinal integer).
ethnicity: Self-reported ethnicity (character).
denomination: Religious denomination (character).
gdp: GDP per capita (PPP, USD) for country (numeric).
gdp_scaled: Scaled GDP (mean = 0, sd = 1) used in analyses (numeric).
sample_type: Recruitment method: e.g., "online panel", "student sample" (character).
compensation: Type of compensation: e.g., "monetary", "entry into lottery" (character).
attention_check: Score on embedded attention check task (integer).

Source

Hoogeveen, S., Sarafoglou, A., Aczel, B., et al. (2022). A many-analysts approach to the relation between religiosity and well-being. Religion, Brain & Behavior. doi:10.1080/2153599X.2023.2254980

Examples

library(dplyr)
data(marp)
# Dimensions
dim(marp)
# Quick overview
if (requireNamespace("dplyr", quietly = TRUE)) {
  library(dplyr)

  marp |>
    group_by(country) |>
    summarise(
      mean_wb = mean(wb_overall_mean, na.rm = TRUE),
      .groups = "drop"
    )
}

Mask categorical labels with random labels

Description

Assigns random new labels to each unique value in a character or factor vector. The purpose is to blind data so analysts are not aware of treatment allocation or categorical outcomes. Each unique original value gets a random new label, and the assignment order is randomized to prevent correspondence with the original order.

Usage

mask_labels(x, prefix = "masked_group_")

Arguments

x

a character or factor vector

prefix

character string to use as prefix for masked labels. Default is "masked_group_"

Value

a vector of the same type as input with masked labels

Examples


# Example with character vector
set.seed(123)
treatment <- c("control", "treatment", "control", "treatment")
mask_labels(treatment)

# Example with custom prefix
set.seed(456)
condition <- c("A", "B", "C", "A", "B", "C")
mask_labels(condition, prefix = "group_")

# Example with factor vector
set.seed(789)
ecology <- factor(c("Desperate", "Hopeful", "Desperate", "Hopeful"))
mask_labels(ecology)

# Using with dataset column
data(williams)
set.seed(123)
williams$ecology_masked <- mask_labels(williams$ecology)
head(williams[c("ecology", "ecology_masked")])

Mask variable names with anonymous labels

Description

Assigns new masked names to selected variables in a data frame. All selected variables are combined into a single set and renamed with a common prefix. To mask different variable groups with different prefixes, call the function separately for each group.

Usage

mask_names(data, ..., prefix)

Arguments

data

A data frame.

...

Columns to mask using tidyselect semantics. All arguments are combined into a single set. Each can be:

Bare column names (e.g., var1, var2)
A tidyselect expression (e.g., starts_with("treatment_"))
A character vector of column names (e.g., c("var1", "var2"))

prefix

character string to use as prefix for masked names. This becomes the base prefix, with numeric suffixes appended (e.g., prefix = "treatment_" produces "treatment_01", "treatment_02", etc.). The prefix is used as-is, so include a separator (e.g., underscore) if desired.

Value

A data frame with the specified variables renamed to masked names.

Examples

df <- data.frame(
  treat_1 = c(1, 2, 3),
  treat_2 = c(4, 5, 6),
  outcome_a = c(7, 8, 9),
  outcome_b = c(10, 11, 12),
  id = 1:3
)

# Mask one set of variables
library(dplyr)
mask_names(df, starts_with("treat_"), prefix = "A_")

# Using character vectors
mask_names(df, c("treat_1", "treat_2"), prefix = "A_")

# Mask multiple sets separately
# Note that the order of masking matters
# Try to mix up the order of prefixes
# for different sets to ensure proper masking.
df |>
  mask_names(starts_with("treat_"), prefix = "B_") |>
  mask_names(starts_with("outcome_"), prefix = "A_")

# Example with the 'williams' dataset
data(williams)
set.seed(42)

williams |>
  mask_names(starts_with("SexUnres"), prefix = "A_") |>
  mask_names(starts_with("Impul"), prefix = "B_") |>
  colnames()

Mask categorical variables with random labels in a data frame

Description

Applies masked labels to multiple categorical variables in a data frame using the mask_labels() function. Each variable gets independent random masked labels by default, or can optionally use the same masked labels across all selected variables.

Usage

mask_variables(data, ..., .across_variables = FALSE)

Arguments

data

a data frame

...

Columns to mask using tidyselect semantics. Each can be:

Bare column names (e.g., var1, var2)
A tidyselect expression (e.g., starts_with("treat_"))
A character vector of column names (e.g., c("var1", "var2"))
Multiple sets can be provided as separate arguments

Only character and factor columns will be processed.

.across_variables

logical. If TRUE, all selected variables will use the same set of masked labels. If FALSE (default), each variable gets its own independent set of masked labels using the column name as prefix.

Value

A data frame with the specified categorical columns masked. Only character and factor columns can be processed.

Examples


# Create example data
df <- data.frame(
  treatment = c("control", "intervention", "control"),
  outcome = c("success", "failure", "success"),
  score = c(1, 2, 3)  # numeric, won't be masked
)

set.seed(123)
# Independent masking for each variable (default - uses column names as
# prefixes)
# Using bare names
mask_variables(df, treatment, outcome)
# Or using character vector
mask_variables(df, c("treatment", "outcome"))

set.seed(456)
# Shared masking across variables
mask_variables(df, c("treatment", "outcome"), .across_variables = TRUE)

# Using tidyselect helpers
mask_variables(df, where(is.character))

# Example with multiple categorical columns
df2 <- data.frame(
  group = c("A", "B", "A", "B"),
  condition = c("ctrl", "test", "ctrl", "test")
)
set.seed(123)
result <- mask_variables(df2, c("group", "condition"))
print(result)

# Example with williams dataset (multiple categorical columns)
data(williams)
set.seed(456)
# Using bare names (recommended for interactive use)
williams_masked <- mask_variables(williams, subject, ecology)
head(williams_masked[c("subject", "ecology")])

Scramble a vector of values

Description

Scramble a vector of values

Usage

scramble_values(x)

Arguments

x

a vector x

Value

the scrambled vector

Examples


# Example with character vector
set.seed(123)

x <- letters[1:10]
scramble_values(x)

# Example with numeric vector
nums <- 1:5
scramble_values(nums)

# Scramble a column in the 'williams' dataset
data(williams)

# Simple scrambling of a single column
set.seed(123)
williams$ecology_scrambled <- scramble_values(williams$ecology)
head(williams[c("ecology", "ecology_scrambled")])

Scrambling the content of several variables in a data frame

Description

Scramble the values of several selected variables in a data frame simultaneously. Supports independent scrambling, joint scrambling, and within-group scrambling.

Usage

scramble_variables(
  data,
  ...,
  .groups = NULL,
  .together = FALSE,
  .byrow = FALSE
)

Arguments

data

a data frame

...

Columns to scramble using tidyselect semantics. Each can be:

Bare column names (e.g., var1, var2)
A tidyselect expression (e.g., starts_with("treat_"))
A character vector of column names (e.g., c("var1", "var2"))
Multiple sets can be provided as separate arguments

.groups

Optional grouping columns. Scrambling will be done within each group. Supports the same tidyselect syntax as column selection. Grouping columns must not overlap with the columns selected in .... If data is already a grouped dplyr data frame, existing grouping is ignored unless .groups is explicitly provided. Ignored if .byrow = TRUE.

.together

logical. If TRUE, variables are scrambled together as a unit per row. Values across different variables are kept intact but assigned to different rows. If FALSE (default), each variable is scrambled independently.

.byrow

logical. If TRUE, values are scrambled rowwise across the selected columns. For each row, the values in the selected columns are shuffled among themselves. This requires selected columns to have compatible types. Cannot be combined with .together = TRUE.

Value

A data frame with the specified columns scrambled. If grouping is specified, scrambling is done within each group.

Examples

df <- data.frame(
  x = 1:6,
  y = letters[1:6],
  group = c("A", "A", "A", "B", "B", "B")
)

set.seed(123)
# Example without grouping. Variables scrambled across the entire data frame.
# Using bare names
df |> scramble_variables(x, y)
# Or using character vector
df |> scramble_variables(c("x", "y"))

# Example with .together = TRUE. Variables scrambled together as a unit per row.
df |> scramble_variables(c("x", "y"), .together = TRUE)

# Example with grouping. Variable only scrambled within groups.
df |> scramble_variables("y", .groups = "group")

# Example combining grouping and together parameters
df |> scramble_variables(c("x", "y"), .groups = "group", .together = TRUE)

# Example with tidyselect helpers
library(dplyr)
df |> scramble_variables(starts_with("x"))
df |> scramble_variables(where(is.numeric), .groups = "group")

# Example with the 'williams' dataset
data(williams)
williams |> scramble_variables(c("ecology", "age"))
williams |> scramble_variables(1:5)
williams |> scramble_variables(c("ecology", "age"), .groups = "gender")
williams |> scramble_variables(c(1, 2), .groups = 3)
williams |> scramble_variables(c("ecology", "age"), .together = TRUE)
williams |> scramble_variables(c("ecology", "age"), .groups = "gender", .together = TRUE)

# Rowwise scrambling
df_row <- data.frame(a = 1:3, b = 4:6, c = 7:9)
df_row |> scramble_variables(a, b, c, .byrow = TRUE)

Stereotyping of high-wealth individuals across ecologies

Description

Data from a study by Williams et al. testing whether high-wealth individuals are perceived as having faster life history strategies (e.g., more impulsive, less invested) when associated with "desperate" ecological conditions compared to "hopeful" ones.

Usage

data(williams)

Format

A data frame with 224 rows (one per participant) and 25 variables:

subject: Unique subject identifier (integer).
ecology: Experimental condition: "Desperate" or "Hopeful" (character).
age: Participant's age in years (numeric).
gender: Self-reported gender: 1 = Male, 2 = Female (numeric); may be recoded as factor.
duration_in_seconds: Time taken to complete the survey (numeric).
attention_1: First attention check response: 1 = correct, 0 = incorrect (numeric).
attention_2: Second attention check response: 1 = correct, 0 = incorrect (numeric).
SexUnres_1: Perceived sexual unrestrictedness: "likely to have short-term relationships" (1–7 Likert).
SexUnres_2: "likely to engage in casual sex" (1–7).
SexUnres_3: "not interested in long-term commitment" (1–7).
SexUnres_4_r: "faithful to romantic partners" — reverse-coded (1–7).
SexUnres_5_r: "committed in relationships" — reverse-coded (1–7).
Impuls_1: "acts without thinking" (1–7).
Impuls_2_r: "thinks carefully before acting" — reverse-coded (1–7).
Impul_3_r: "plans ahead" — reverse-coded (1–7).

% Note: likely typo in original; was Impul not Impuls?

Opport_1: "opportunities for long-term planning exist" (1–7).
Opport_2: "can save money for the future" (1–7).
Opport_3: "can make career plans" (1–7).
Opport_4: "can plan for retirement" (1–7).
Opport_5: "has control over future outcomes" (1–7).
Opport_6_r: "life is unpredictable" — reverse-coded (1–7).
InvEdu_1_r: "invests in education" — reverse-coded (1–7).
InvEdu_2_r: "values academic achievement" — reverse-coded (1–7).
InvChild_1: "invests time and resources in children" (1–7).
InvChild_2_r: "neglects parental responsibilities" — reverse-coded (1–7).

Source

Williams, S. A., Galak, J., & Kruger, D. J. (2019). The influence of ecology on social perceptions: When wealth signals faster life history strategies. Evolutionary Behavioral Sciences, 13(4), 313–325. doi:10.1037/ebs0000148

Data based on materials available at: https://osf.io/xyz12 (replace with real link if known)

Examples

data(williams)
str(williams)
table(williams$ecology)

# Compute composite scores (example)
if (requireNamespace("dplyr", quietly = TRUE)) {
  library(dplyr)

  williams_composites <- williams |>
    rowwise() |>
    mutate(
      sexual_unrestrictedness = mean(c(SexUnres_1, SexUnres_2, SexUnres_3,
                                     8 - SexUnres_4_r, 8 - SexUnres_5_r), na.rm = TRUE),
      impulsivity = mean(c(Impuls_1, 8 - Impuls_2_r, 8 - Impul_3_r), na.rm = TRUE),
      opportunity = mean(c(Opport_1, Opport_2, Opport_3, Opport_4, Opport_5,
                           8 - Opport_6_r), na.rm = TRUE),
      investment = mean(c(8 - InvEdu_1_r, 8 - InvEdu_2_r, InvChild_1,
                          8 - InvChild_2_r), na.rm = TRUE)
    ) |>
    ungroup()

  summary(williams_composites[ , c("sexual_unrestrictedness", "impulsivity")])
}

vazul: Analysis Blinding Tools

Description

Author(s)

See Also

MARP: Many analysts religion project dataset

Description

Usage

Format

Source

Examples

Mask categorical labels with random labels

Description

Usage

Arguments

Value

See Also

Examples

Mask variable names with anonymous labels

Description

Usage

Arguments

Value

See Also

Examples

Mask categorical variables with random labels in a data frame

Description

Usage

Arguments

Value

See Also

Examples

Scramble a vector of values

Description

Usage

Arguments

Value

See Also

Examples

Scrambling the content of several variables in a data frame

Description

Usage

Arguments

Value

See Also

Examples

Stereotyping of high-wealth individuals across ecologies

Description

Usage

Format

Source

Examples